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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
ATAC-seq
21
snATAC-seq
Assay category
52
Transcription
41
DNA methylation
21
DNA accessibility
Date released
95
May, 2022
19
September, 2020
Available data
3152
bam
2974
bigWig
1586
tsv
1480
bed narrowPeak
1232
fastq
956
bigBed narrowPeak
398
tagAlign
319
bed broadPeak
284
bigBed broadPeak
269
bed bed3+
158
txt
114
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
114
Homo sapiens
Biosample type
114
primary cell
Organ
41
epithelium
41
pancreas
Project
114
HPAP
Lab
114
Klaus Kaestner, Upenn
assay_title!
ATAC-seq
organ_slims!
bodily fluid
target.investigated_as!
other context
BIOSAMPLE
ASSAY
114 results
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single cell RNA-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
pancreatic beta cell
16
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