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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
ATAC-seq
23
single cell RNA-seq
22
total RNA-seq
6
DNase-seq
1
pCHi-C
Assay category
77
DNA binding
45
Transcription
6
DNA accessibility
Target of assay
56
transcription factor
18
control
12
RNA binding protein
1
chromatin remodeller
Date released
38
September, 2020
29
December, 2018
20
October, 2018
14
November, 2018
10
November, 2017
6
January, 2019
6
May, 2022
4
December, 2017
1
August, 2018
1
July, 2018
Available data
129
fastq
90
bam
66
bigWig
65
bed narrowPeak
65
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
txt
1
bedpe bed3+
1
tsv
1
zippedFastqFolder
Organism
129
Homo sapiens
Biosample type
46
cell line
43
tissue
39
primary cell
1
in vitro differentiated cells
Organ
36
pancreas
35
blood
35
bodily fluid
17
epithelium
17
liver
11
adipose tissue
11
connective tissue
8
spleen
Project
91
AMP
38
HPAP
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
85
AMP-T2D consortium
38
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
129 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
DNase-seq
pCHi-C
cell line
GM12878
35
HepG2
11
tissue
body of pancreas
11
2
spleen
7
1
omental fat pad
6
1
islet of Langerhans
6
right lobe of liver
4
1
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primary cell
Langerhans cell
22
pancreatic alpha cell
1
15
pancreatic beta cell
1
in vitro differentiated cells
white fat cell
1
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