Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
ATAC-seq
35
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
35
DNA binding
4
DNA accessibility
Target of assay
21
histone
21
histone modification
14
broad histone mark
9
control
7
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
58
February, 2021
26
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
2
June, 2019
Available data
93
bam
84
bigWig
58
tsv
30
bed narrowPeak
25
bigBed narrowPeak
7
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
97
Homo sapiens
Biosample type
58
cell line
37
tissue
2
primary cell
Organ
768
liver
736
pancreas
659
connective tissue
485
adipose tissue
374
epithelium
346
heart
282
brain
279
kidney
190
vasculature
184
blood vessel
147
bone element
114
limb
96
artery
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
97
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
97
AMP-T2D consortium
assay_title!
ATAC-seq
month_released!
September, 2018
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
97 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
23
2
coronary artery
1
5
2
pulmonary artery
2
pituitary gland
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download