Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
4
DNase-seq
4
Hi-C
4
total RNA-seq
ATAC-seq
1
WGBS
Assay category
59
DNA binding
4
3D chromatin structure
4
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
43
histone
43
histone modification
30
broad histone mark
16
control
13
narrow histone mark
Date released
67
October, 2019
32
June, 2019
7
May, 2019
5
July, 2019
3
February, 2020
0
December, 2018
Available data
67
bam
51
bigWig
46
bed narrowPeak
46
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
72
Homo sapiens
Biosample type
72
tissue
Organ
102
brain
72
limb
56
vasculature
55
blood vessel
47
epithelium
41
kidney
41
nerve
29
heart
27
artery
27
blood
27
bodily fluid
21
eye
21
pancreas
21
vein
19
connective tissue
17
liver
12
adipose tissue
10
musculature of body
7
spleen
4
gonad
4
ovary
2
pericardium
1
lymph node
1
pituitary gland
Project
72
AMP
Genome assembly (visualization)
51
GRCh38
50
hg19
Lab
72
AMP-T2D consortium
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
72 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
Hi-C
total RNA-seq
WGBS
tissue
tibial nerve
35
2
4
tibial artery
23
2
gastrocnemius medialis
4
islet of Langerhans
1
muscle of leg
1
Download