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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
total RNA-seq
24
ChIP-seq
Assay category
40
Transcription
24
DNA binding
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
551
February, 2021
406
August, 2017
406
November, 2017
364
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
July, 2019
98
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
40
tsv
39
bam
39
fastq
31
bigWig
16
bed narrowPeak
Organism
64
Homo sapiens
Biosample type
39
in vitro differentiated cells
25
tissue
Organ
13
embryo
12
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
pancreas
1
spinal cord
Project
64
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
64
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
inconsistent control read length
assay_title!
ATAC-seq
month_released!
November, 2020
organ_slims!
bone element
BIOSAMPLE
ASSAY
64 results
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total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
4
9
definitive endodermal cell
2
3
embryonic stem cell
2
3
endocrine cell
2
3
posterior foregut
2
3
+ See 2 more…
tissue
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
+ See 20 more…
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