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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
155
DNase-seq
105
ChIP-seq
2
total RNA-seq
Assay category
155
DNA accessibility
105
DNA binding
2
Transcription
Target of assay
49
histone
49
histone modification
37
control
27
broad histone mark
22
narrow histone mark
19
transcription factor
15
RNA binding protein
Date released
551
February, 2021
406
August, 2017
406
November, 2017
364
May, 2021
243
August, 2021
241
May, 2020
225
October, 2019
186
June, 2019
168
July, 2018
123
May, 2022
113
May, 2019
98
February, 2023
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
22
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
262
bam
225
bigWig
223
bed narrowPeak
223
bigBed narrowPeak
155
bed bed3+
155
bed broadPeak
155
bigBed broadPeak
60
fastq
2
tsv
Organism
262
Homo sapiens
Biosample type
205
tissue
57
primary cell
Organ
81
kidney
57
pancreas
43
musculature of body
41
connective tissue
35
heart
limb
30
brain
24
adipose tissue
22
epithelium
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
Project
262
AMP
Genome assembly (visualization)
225
GRCh38
202
hg19
Lab
262
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
ATAC-seq
organ_slims!
bone element
limb
BIOSAMPLE
ASSAY
262 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
body of pancreas
2
33
heart
18
endocrine pancreas
16
kidney
13
brain
12
+ See 32 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 18 more…
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