Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
17
ChIP-seq
7
total RNA-seq
1
Hi-C
Assay category
17
DNA binding
7
Transcription
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
transcription factor
1
RNA binding protein
Date released
47
September, 2018
41
May, 2022
40
February, 2023
34
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
26
August, 2017
20
June, 2019
19
December, 2017
16
September, 2020
15
November, 2019
13
July, 2019
10
May, 2021
6
August, 2021
6
December, 2019
6
November, 2017
6
November, 2020
5
May, 2019
4
March, 2020
3
August, 2018
3
October, 2022
2
October, 2018
June, 2018
Available data
24
bam
21
bigWig
14
bed narrowPeak
7
tsv
3
tagAlign
1
bedpe bed3+
1
hic
Organism
25
Homo sapiens
Biosample type
20
cell line
5
in vitro differentiated cells
Organ
80
pancreas
25
epithelium
3
heart
2
connective tissue
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
24
AMP
1
T1D
Genome assembly (visualization)
22
hg19
21
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_title!
ATAC-seq
month_released!
June, 2018
BIOSAMPLE
ASSAY
25 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
Hi-C
cell line
EndoC_BH1
14
5
1
in vitro differentiated cells
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
Download