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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
244
ChIP-seq
Assay category
244
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
244
fastq
243
bam
240
bigWig
236
bed narrowPeak
236
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
244
Homo sapiens
Biosample type
241
cell line
3
primary cell
Organ
241
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
244
AMP
Genome assembly (visualization)
238
hg19
204
GRCh38
Lab
244
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
assay_title!
ATAC-seq
organ_slims!
pericardium
BIOSAMPLE
ASSAY
244 results
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ChIP-seq
cell line
HepG2
241
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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