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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • ATAC-seq
  • 19total RNA-seq
  • 5ChIP-seq
  • 4DNase-seq
  • 4pCHi-C
  • 1RRBS
Assay category
  • 19Transcription
  • 5DNA binding
  • 4DNA accessibility
  • 1DNA methylation
Target of assay
  • 3histone
  • 3histone modification
  • 3narrow histone mark
  • 1RNA binding protein
  • 1control
  • 1transcription factor
Date released
  • 20October, 2019
  • 7June, 2019
  • 4February, 2023
  • 1February, 2020
  • 1July, 2019
Available data
  • 7bam
  • 6bed narrowPeak
  • 6bigBed narrowPeak
  • 6bigWig
  • 5tsv
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 33Homo sapiens
Biosample type
  • 28tissue
  • 5primary cell
Organ
  • 794pancreas
  • 768liver
  • 659connective tissue
  • 485adipose tissue
  • 421epithelium
  • 346heart
  • 282brain
  • 279kidney
  • 190vasculature
  • 184blood vessel
  • 147bone element
  • 114limb
  • 96artery
  • 95musculature of body
  • 68blood
  • 68bodily fluid
  • 42nerve
  • 37embryo
  • 33eye
  • 24spleen
  • 22vein
  • 20lung
  • 18ureter
  • 5gonad
  • 5ovary
  • 4skeleton
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 33AMP
Genome assembly (visualization)
  • 7hg19
  • 6GRCh38
Lab
  • 33AMP-T2D consortium
assay_title!
  • ATAC-seq
BIOSAMPLE
ASSAY

33 results

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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
islet of Langerhans1424
retina33
pigmented layer of retina2
primary cell
retinal pigment epithelial cell311
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