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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
49
ATAC-seq
47
WGBS
ChIP-seq
Assay category
55
Transcription
49
DNA accessibility
47
DNA methylation
Date released
80
May, 2022
37
February, 2023
19
September, 2020
7
August, 2020
6
February, 2021
October, 2022
2
March, 2020
Available data
80
zippedFastqFolder
69
fastq
12
bigWig
8
tsv
2
bam
Organism
151
Homo sapiens
Biosample type
149
primary cell
2
cell line
Organ
179
pancreas
151
epithelium
47
kidney
19
lung
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
AMP
149
HPAP
2
T1D
Genome assembly (visualization)
12
GRCh38
2
hg19
Lab
149
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
CRISPR RNA-seq
ChIP-seq
award.project!
AMP
month_released!
October, 2022
BIOSAMPLE
ASSAY
151 results
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total RNA-seq
ATAC-seq
WGBS
primary cell
pancreatic alpha cell
42
29
31
pancreatic beta cell
11
16
16
pancreatic acinar cell
4
cell line
EndoC_BH1
2
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