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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
total RNA-seq
ChIP-seq
4
ATAC-seq
3
small RNA-seq
2
DNase-seq
2
WGBS
Assay category
398
Transcription
6
DNA accessibility
2
DNA methylation
Date released
386
February, 2021
12
July, 2019
3
August, 2017
1
January, 2018
1
June, 2019
1
November, 2018
1
October, 2017
1
October, 2019
Available data
406
bigWig
405
bam
401
tsv
7
fastq
6
bed narrowPeak
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
406
Homo sapiens
Biosample type
404
tissue
2
primary cell
Organ
495
connective tissue
462
pancreas
406
adipose tissue
200
epithelium
190
liver
110
heart
92
kidney
76
vasculature
74
blood vessel
60
artery
58
bone element
50
brain
43
limb
41
musculature of body
18
ureter
15
embryo
7
nerve
4
eye
4
spleen
3
vein
1
blood
1
bodily fluid
1
pericardium
Project
406
AMP
Genome assembly (visualization)
404
GRCh38
404
hg19
Lab
406
AMP-T2D consortium
assay_title!
CRISPR RNA-seq
ChIP-seq
BIOSAMPLE
ASSAY
406 results
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total RNA-seq
ATAC-seq
small RNA-seq
DNase-seq
WGBS
tissue
adipose tissue
381
2
2
omental fat pad
4
1
1
2
subcutaneous adipose tissue
6
1
1
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
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