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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
15
RRBS
Assay category
32
DNA methylation
Date released
19
July, 2019
7
November, 2018
6
August, 2017
Available data
3118
bam
2908
bigWig
1576
tsv
1504
bed narrowPeak
1346
fastq
808
bigBed narrowPeak
398
tagAlign
153
zippedFastqFolder
116
bed broadPeak
99
txt
79
bigBed broadPeak
69
bed bed3+
32
bed bedMethyl
32
bigBed bedMethyl
23
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
32
Homo sapiens
Biosample type
24
tissue
7
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
17
GRCh38
15
hg19
Lab
32
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
CRISPR RNA-seq
DNase-seq
organ_slims!
kidney
BIOSAMPLE
ASSAY
32 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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