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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
17
WGBS
Assay category
36
DNA methylation
Date released
23
July, 2019
7
November, 2018
6
August, 2017
Available data
3353
bam
3129
bigWig
1778
bed narrowPeak
1600
tsv
1319
fastq
1005
bigBed narrowPeak
396
tagAlign
315
bed broadPeak
279
bigBed broadPeak
272
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
36
Homo sapiens
Biosample type
25
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
36
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
CRISPR RNA-seq
MeRIP-seq
audit.WARNING.category!
inconsistent assembly
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
36 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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