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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
6
WGBS
3
ChIP-seq
3
snDrop-seq
Assay category
27
DNA accessibility
18
Transcription
6
DNA methylation
3
DNA binding
Target of assay
3
control
Date released
194
August, 2021
May, 2022
141
February, 2021
135
August, 2017
125
February, 2023
97
October, 2019
83
May, 2021
81
May, 2020
71
November, 2017
59
September, 2020
47
September, 2023
32
March, 2020
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
16
January, 2021
15
April, 2019
15
November, 2018
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
8
June, 2019
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
89
txt
45
fastq
14
tsv
6
csv
3
bam
3
tagAlign
Organism
141
Homo sapiens
Biosample type
93
tissue
45
primary cell
3
cell line
Organ
84
bone element
8
kidney
6
epithelium
6
pancreas
2
artery
2
blood vessel
2
heart
2
vasculature
1
liver
Project
96
AMP
45
HPAP
Genome assembly (visualization)
hg19
545
GRCh38
Lab
96
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
assay_title!
CRISPR RNA-seq
assembly!
hg19
files.file_type!
bed narrowPeak
month_released!
May, 2022
BIOSAMPLE
ASSAY
141 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ChIP-seq
snDrop-seq
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
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primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
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