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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
4
ChIP-seq
3
STARR-seq
1
Hi-C
1
whole genome sequencing assay
Assay category
10
Transcription
4
DNA binding
1
3D chromatin structure
1
DNA sequencing
Target of assay
4
control
Date released
160
May, 2022
99
February, 2023
60
May, 2021
59
September, 2020
45
February, 2021
40
May, 2024
19
April, 2020
19
August, 2021
16
January, 2021
10
November, 2020
7
August, 2020
4
March, 2023
2
March, 2019
Available data
10
tsv
1
bedpe bed3+
1
vcf
Organism
19
Homo sapiens
Biosample type
17
cell line
2
tissue
Organ
kidney
16
liver
2
pancreas
Project
19
AMP
Genome assembly (visualization)
hg19
Lab
AMP-T2D consortium
19
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
CRISPR RNA-seq
assembly!
hg19
lab.title!
AMP-T2D consortium
organ_slims!
kidney
BIOSAMPLE
ASSAY
19 results
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total RNA-seq
ChIP-seq
STARR-seq
Hi-C
whole genome sequencing assay
cell line
HepG2
9
4
2
1
Synthesized DNA
1
tissue
islet of Langerhans
1
1
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