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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
1
DNase-seq
Assay category
126
DNA binding
89
Transcription
15
DNA methylation
1
DNA accessibility
Target of assay
91
histone
91
histone modification
53
broad histone mark
50
control
narrow histone mark
23
transcription factor
1
RNA binding protein
Date released
692
February, 2021
314
May, 2020
254
May, 2021
231
August, 2017
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
96
July, 2019
84
November, 2017
81
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
24
November, 2019
23
February, 2018
22
February, 2020
22
May, 2019
21
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
10
December, 2019
10
October, 2017
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
4
August, 2018
4
March, 2023
4
October, 2022
3
June, 2018
1
August, 2022
Available data
235
fastq
230
bam
212
bigWig
bed narrowPeak
89
tsv
56
tagAlign
30
bigBed narrowPeak
27
bed bed3+
26
bed broadPeak
10
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
230
Homo sapiens
Biosample type
192
tissue
21
in vitro differentiated cells
18
primary cell
Organ
125
pancreas
65
connective tissue
44
adipose tissue
28
liver
12
epithelium
11
musculature of body
Project
231
AMP
Genome assembly (visualization)
124
hg19
121
GRCh38
Lab
231
AMP-T2D consortium
Audit category:
28
missing controlled_by
assay_title!
CRISPR RNA-seq
files.file_type!
bed narrowPeak
organ_slims!
limb
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
231 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans
18
89
subcutaneous abdominal adipose tissue
25
3
liver
23
3
1
white adipose tissue
12
skeletal muscle tissue
7
4
+ See 3 more…
in vitro differentiated cells
adipocyte
21
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic endocrine cell
4
skeletal muscle myoblast
1
1
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