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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
29
ChIP-seq
10
ATAC-seq
2
DNase-seq
Assay category
54
Transcription
29
DNA binding
12
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
transcription factor
1
RNA binding protein
Date released
62
February, 2021
26
October, 2019
4
May, 2019
3
July, 2019
June, 2019
Available data
95
bam
78
bigWig
67
bed narrowPeak
58
tsv
22
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
tagAlign
Organism
95
Homo sapiens
Biosample type
62
cell line
31
tissue
2
primary cell
Organ
666
pancreas
536
connective tissue
424
adipose tissue
353
liver
290
epithelium
210
brain
169
vasculature
167
blood vessel
165
heart
95
artery
82
limb
66
bone element
54
kidney
42
nerve
33
embryo
20
vein
18
spleen
14
musculature of body
9
blood
9
bodily fluid
8
skeleton
1
pericardium
1
pituitary gland
Project
95
AMP
Genome assembly (visualization)
86
GRCh38
86
hg19
Lab
95
AMP-T2D consortium
assay_title!
CRISPR RNA-seq
month_released!
June, 2019
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
95 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
2
8
tissue
tibial artery
23
1
2
coronary artery
4
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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