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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
7
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
7
DNA binding
Target of assay
11
histone
11
histone modification
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
8
August, 2021
7
February, 2018
4
December, 2017
2
May, 2021
1
January, 2018
Available data
28
bam
22
bigWig
19
fastq
14
tsv
7
bed narrowPeak
2
bed bed3+
Organism
22
Homo sapiens
Biosample type
14
in vitro differentiated cells
8
cell line
Organ
570
liver
554
pancreas
552
connective tissue
423
adipose tissue
253
epithelium
184
heart
130
vasculature
126
blood vessel
116
brain
116
kidney
79
artery
77
limb
58
bone element
57
musculature of body
54
blood
54
bodily fluid
23
nerve
22
embryo
18
ureter
14
spleen
10
vein
5
eye
1
pericardium
Project
22
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
1
hg18
Lab
22
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
inconsistent control read length
assay_title!
CRISPR RNA-seq
month_released!
October, 2022
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
22 results
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total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
7
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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