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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
3
ATAC-seq
3
DNase-seq
2
Hi-C
1
FAIRE-seq
Assay category
30
DNA binding
7
DNA accessibility
2
3D chromatin structure
Target of assay
22
histone
22
histone modification
13
broad histone mark
9
narrow histone mark
8
control
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
39
October, 2019
32
February, 2021
19
September, 2020
15
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
34
bam
23
bigWig
20
bed narrowPeak
20
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
4
bed bed3+
1
hdf5
1
hic
1
tar
Organism
39
Homo sapiens
Biosample type
21
primary cell
15
cell line
3
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
39
AMP
Genome assembly (visualization)
24
hg19
20
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
1
audit script error
Audit category:
1
inconsistent assembly
assay_title!
CRISPR RNA-seq
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
17
2
1
1
cell line
Panc1
13
1
1
tissue
islet of Langerhans
3
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