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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
16
ATAC-seq
6
total RNA-seq
1
pCHi-C
Assay category
28
DNA binding
16
DNA accessibility
6
Transcription
Target of assay
20
histone
20
histone modification
12
transcription factor
10
broad histone mark
narrow histone mark
6
control
5
RNA binding protein
Date released
258
August, 2021
101
November, 2017
96
February, 2021
95
August, 2017
69
February, 2023
68
October, 2019
51
May, 2021
47
September, 2023
32
March, 2020
29
October, 2018
27
May, 2022
25
February, 2020
25
May, 2024
24
May, 2020
22
May, 2019
19
April, 2020
17
July, 2019
16
December, 2017
16
June, 2019
16
November, 2018
15
April, 2019
14
May, 2023
10
November, 2020
9
October, 2017
8
February, 2018
8
January, 2021
5
December, 2018
5
December, 2019
5
January, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
1
bam
1
tagAlign
Organism
51
Homo sapiens
Biosample type
33
in vitro differentiated cells
primary cell
16
cell line
2
tissue
Organ
18
pancreas
17
epithelium
1
thymus
Project
50
AMP
1
T1D
Genome assembly (visualization)
hg19
125
GRCh38
Lab
34
Kyle Gaulton, UCSD
17
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
assembly!
hg19
biosample_type!
primary cell
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
pCHi-C
in vitro differentiated cells
embryonic stem cell
27
5
pancreatic PP cell
1
cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
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