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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
814
histone
814
histone modification
410
broad histone mark
404
narrow histone mark
194
control
129
transcription factor
47
RNA binding protein
11
chromatin remodeller
7
recombinant protein
3
other context
3
other post-translational modification
Date released
11
October, 2018
6
January, 2019
5
May, 2019
5
May, 2024
4
April, 2019
4
August, 2017
4
June, 2019
3
November, 2017
2
December, 2018
2
November, 2018
1
November, 2019
Available data
46
bigWig
45
bed narrowPeak
42
bam
38
bigBed narrowPeak
28
fastq
5
bed broadPeak
5
bigBed broadPeak
2
bed bed3+
Organism
47
Homo sapiens
Biosample type
26
tissue
11
cell line
10
primary cell
in vitro differentiated cells
Organ
liver
11
heart
10
blood
10
bodily fluid
9
pancreas
6
connective tissue
6
epithelium
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
47
AMP
Genome assembly (visualization)
45
GRCh38
41
hg19
Lab
42
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
assay_title!
CRISPR genome editing followed by DNA sequencing
biosample_type!
in vitro differentiated cells
month_released!
November, 2020
organ_slims!
liver
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
islet of Langerhans
2
+ See 7 more…
cell line
GM12878
10
EndoC_BH1
1
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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