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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
DNase-seq
94
ChIP-seq
Assay category
162
DNA accessibility
94
DNA binding
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
397
November, 2017
310
August, 2021
276
October, 2019
227
August, 2017
215
February, 2021
194
May, 2020
192
May, 2021
162
June, 2019
120
July, 2018
115
May, 2019
100
February, 2023
94
December, 2017
86
November, 2018
80
April, 2019
67
July, 2019
66
May, 2022
61
March, 2020
60
November, 2019
51
October, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
10
November, 2020
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2022
1
October, 2022
Available data
256
bam
234
bed narrowPeak
234
bigWig
212
bigBed narrowPeak
177
bed bed3+
162
bed broadPeak
162
bigBed broadPeak
94
fastq
Organism
256
Homo sapiens
Biosample type
210
tissue
43
in vitro differentiated cells
primary cell
3
stem cell
Organ
68
kidney
63
liver
32
limb
32
musculature of body
27
heart
25
brain
19
epithelium
18
ureter
13
embryo
4
pancreas
3
blood vessel
3
eye
3
vasculature
2
artery
1
adipose tissue
connective tissue
Project
256
AMP
Genome assembly (visualization)
239
GRCh38
223
hg19
Lab
256
AMP-T2D consortium
Audit category:
27
inconsistent control
5
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_title!
CRISPR genome editing followed by DNA sequencing
biosample_type!
primary cell
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
256 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
liver
38
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 35 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
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