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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
362
ChIP-seq
Assay category
362
DNA binding
Target of assay
241
transcription factor
85
histone
85
histone modification
68
control
66
recombinant protein
50
broad histone mark
narrow histone mark
34
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
362
November, 2017
301
August, 2021
215
February, 2021
189
August, 2017
180
May, 2021
167
May, 2020
162
June, 2019
145
October, 2019
120
July, 2018
100
February, 2023
86
November, 2018
82
May, 2019
78
December, 2017
67
July, 2019
66
May, 2022
58
March, 2020
57
April, 2019
56
November, 2019
47
September, 2023
40
October, 2018
35
December, 2018
31
February, 2018
27
January, 2019
25
May, 2024
23
February, 2020
20
October, 2017
19
April, 2020
14
May, 2023
10
November, 2020
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2022
1
October, 2022
Available data
357
bam
308
fastq
298
bigWig
281
bed narrowPeak
281
bigBed narrowPeak
54
bed broadPeak
52
bigBed broadPeak
52
tagAlign
3
tar
Organism
362
Homo sapiens
Biosample type
308
cell line
54
tissue
primary cell
Organ
308
liver
54
brain
Project
362
AMP
Genome assembly (visualization)
261
hg19
249
GRCh38
Lab
362
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
16
inconsistent control read length
4
inconsistent control run_type
assay_title!
CRISPR genome editing followed by DNA sequencing
biosample_type!
primary cell
organ_slims!
connective tissue
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
362 results
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Clear Filters
ChIP-seq
cell line
HepG2
308
tissue
layer of hippocampus
15
caudate nucleus
10
substantia nigra
10
cingulate gyrus
9
middle frontal area 46
9
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