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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
total RNA-seq
38
ATAC-seq
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
66
Transcription
39
DNA accessibility
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
40
November, 2019
39
March, 2020
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
62
bam
58
bigWig
38
bed narrowPeak
38
tsv
24
fastq
7
txt
1
bed bed3+
Organism
106
Homo sapiens
Biosample type
340
primary cell
132
in vitro differentiated cells
106
tissue
21
cell line
Organ
61
pancreas
40
liver
2
heart
2
musculature of body
1
thymus
Project
105
AMP
1
T1D
Genome assembly (visualization)
77
hg19
38
GRCh38
Lab
40
AMP-T2D consortium
40
Karen Mohlke, UNC
26
Kyle Gaulton, UCSD
Audit category:
1
audit script error
assay_title!
CRISPR genome editing followed by DNA sequencing
organ_slims!
adrenal gland
BIOSAMPLE
ASSAY
106 results
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total RNA-seq
ATAC-seq
pCHi-C
single cell RNA-seq
snATAC-seq
tissue
islet of Langerhans
42
18
liver
20
20
skeletal muscle tissue
1
1
cardiac atrium
1
cardiac ventricle
1
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