Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
2
DNase-seq
2
Hi-C
1
FAIRE-seq
1
pCHi-C
Assay category
11
DNA binding
3
DNA accessibility
2
3D chromatin structure
Target of assay
15
histone
15
histone modification
9
broad histone mark
narrow histone mark
2
control
Date released
15
October, 2019
2
March, 2020
Available data
14
bam
10
bigWig
8
bed narrowPeak
8
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
17
Homo sapiens
Biosample type
16
primary cell
1
tissue
Organ
841
pancreas
728
liver
443
epithelium
331
kidney
287
heart
196
connective tissue
169
brain
144
vasculature
139
blood vessel
101
limb
93
adipose tissue
83
musculature of body
69
artery
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
vein
9
bone element
8
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
12
hg19
7
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
CRISPR genome editing followed by DNA sequencing
month_released!
February, 2021
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
Hi-C
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
11
2
2
1
tissue
adrenal gland
1
Download