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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
October, 2022
1
March, 2020
Available data
603
bigWig
597
bam
409
fastq
289
bed narrowPeak
266
tsv
153
zippedFastqFolder
103
bigBed narrowPeak
100
tagAlign
46
bed broadPeak
46
bigBed broadPeak
34
bed bed3+
9
bed bedMethyl
9
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
2
csv
1
bed bed3
1
tar
Organism
4
Homo sapiens
Biosample type
7
in vitro differentiated cells
7
tissue
4
primary cell
2
cell line
Organ
4
epithelium
3
pancreas
1
blood vessel
1
vasculature
1
vein
Project
3
HPAP
1
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Audit category:
3
audit script error
assay_title!
CRISPR genome editing followed by sgRNA sequencing
RNA microarray
organ_slims!
heart
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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