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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
49
total RNA-seq
11
single cell RNA-seq
snATAC-seq
1
Hi-C
Assay category
75
DNA accessibility
60
Transcription
1
3D chromatin structure
Date released
122
August, 2021
14
May, 2023
Available data
64
bed narrowPeak
64
xls
57
txt
1
hic
Organism
136
Homo sapiens
Biosample type
136
tissue
Organ
136
kidney
Project
136
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
3295
AMP-T2D consortium
320
Kyle Gaulton, UCSD
276
Klaus Kaestner, Upenn
136
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
9
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_title!
CRISPR genome editing followed by sgRNA sequencing
snATAC-seq
biosample_type!
cell line
BIOSAMPLE
ASSAY
136 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
Hi-C
tissue
kidney
75
49
11
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