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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
DNase-seq
3
WGBS
Assay category
70
DNA binding
7
DNA accessibility
3
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
266
October, 2019
242
August, 2021
223
August, 2017
214
June, 2019
197
May, 2021
158
February, 2021
151
May, 2020
118
May, 2019
98
February, 2023
94
December, 2017
80
April, 2019
80
November, 2018
76
May, 2022
60
July, 2019
47
September, 2023
40
March, 2020
40
May, 2024
40
September, 2020
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2018
19
April, 2020
18
October, 2017
14
May, 2023
11
July, 2018
10
April, 2018
8
January, 2018
8
January, 2021
6
November, 2019
5
December, 2019
5
March, 2023
2
June, 2018
2
November, 2020
1
August, 2018
1
October, 2022
Available data
81
fastq
80
bam
73
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
csv
Organism
80
Homo sapiens
Biosample type
61
cell line
19
tissue
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
80
AMP
Genome assembly (visualization)
73
GRCh38
68
hg19
Lab
80
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
CRISPR genome editing followed by sgRNA sequencing
total RNA-seq
files.file_type!
csv
organ_slims!
pancreas
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
brain
2
omental fat pad
1
right lobe of liver
1
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