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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
47
WGBS
21
snATAC-seq
Assay category
177
Transcription
70
DNA accessibility
47
DNA methylation
Date released
134
May, 2022
76
February, 2023
59
September, 2020
18
February, 2021
7
August, 2020
Available data
153
zippedFastqFolder
142
fastq
10
bigWig
6
tsv
Organism
294
Homo sapiens
Biosample type
294
primary cell
Organ
149
epithelium
149
pancreas
Project
294
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3836
AMP-T2D consortium
343
Kyle Gaulton, UCSD
294
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
audit script error
assay_title!
CRISPR genome editing followed by sgRNA sequencing
audit.ERROR.category!
audit script error
month_released!
November, 2019
organ_slims!
intestine
BIOSAMPLE
ASSAY
294 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
85
21
pancreatic alpha cell
42
29
31
pancreatic beta cell
11
16
16
exocrine cell
39
pancreatic acinar cell
4
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