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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
4
July, 2019
Available data
2660
bam
2506
bigWig
1371
bed narrowPeak
1370
tsv
915
fastq
663
bigBed narrowPeak
375
tagAlign
264
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
153
zippedFastqFolder
75
txt
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
17
hic
15
bedpe bed3+
11
bed bed3
8
csv
6
bed bedgraph
4
hdf5
3
cool
1
bedpe
1
tagAlign bed3+
1
tar
Organism
4
Homo sapiens
Biosample type
4
primary cell
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
assay_title!
CRISPR genome editing followed by sgRNA sequencing
audit.ERROR.category!
inconsistent ontology term
biosample_type!
cell line
month_released!
January, 2018
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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