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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
RRBS
12
WGBS
6
ATAC-seq
4
Hi-C
2
FAIRE-seq
Assay category
25
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Date released
406
November, 2017
289
August, 2017
272
October, 2019
203
May, 2021
199
May, 2022
188
August, 2021
181
February, 2023
148
May, 2020
117
May, 2019
80
April, 2019
79
November, 2018
75
December, 2017
74
October, 2018
70
February, 2021
59
September, 2020
47
September, 2018
47
September, 2023
40
May, 2024
37
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
20
November, 2019
19
April, 2020
16
January, 2021
15
May, 2023
13
March, 2020
9
June, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
November, 2020
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
85
bigWig
82
bam
tsv
21
bed bedMethyl
21
bigBed bedMethyl
7
bed narrowPeak
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
30
tissue
7
primary cell
Organ
13
heart
6
musculature of body
5
epithelium
5
limb
5
vasculature
4
blood vessel
4
brain
4
kidney
2
liver
2
pancreas
1
artery
1
eye
1
pericardium
Project
37
AMP
Genome assembly (visualization)
20
hg19
14
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed bed3+
tsv
BIOSAMPLE
ASSAY
37 results
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Clear Filters
RRBS
WGBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
kidney
1
1
+ See 13 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 2 more…
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