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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
51
single cell RNA-seq
10
snATAC-seq
Assay category
171
Transcription
10
DNA accessibility
Date released
587
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
193
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
158
bam
158
bigWig
158
tsv
44
fastq
Organism
180
Homo sapiens
Biosample type
139
tissue
42
primary cell
Organ
152
pancreas
32
epithelium
19
lung
2
connective tissue
Project
162
AMP
19
LungMap
Genome assembly (visualization)
158
GRCh38
158
hg19
Lab
162
AMP-T2D consortium
19
Xin Sun, UCSD
Audit category:
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
181 results
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Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
tissue
islet of Langerhans
120
lung
9
10
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
4
pancreatic delta cell
4
pancreatic cell
3
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