Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
13
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
9
November, 2018
December, 2018
7
January, 2019
1
October, 2017
Available data
17
bam
17
fastq
13
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
tsv
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
616
liver
521
pancreas
360
epithelium
330
kidney
260
brain
225
heart
206
connective tissue
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
56
eye
42
blood
42
bodily fluid
38
nerve
23
embryo
22
vein
19
lung
18
ureter
17
spleen
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
17
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
17
AMP-T2D consortium
assay_title!
CRISPR genome editing followed by sgRNA sequencing
files.file_type!
tsv
month_released!
August, 2020
December, 2018
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
13
2
1
1
Download