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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ATAC-seq
Assay category
70
DNA accessibility
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
87
fastq
70
bed narrowPeak
16
tsv
11
bam
10
bed bed3
8
bigWig
7
txt
6
bed bed3+
5
bigBed narrowPeak
3
bed bedgraph
Organism
70
Homo sapiens
Biosample type
63
tissue
5
primary cell
2
in vitro differentiated cells
Organ
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
17
epithelium
5
pancreas
1
adipose tissue
1
connective tissue
Project
70
AMP
Genome assembly (visualization)
40
GRCh38
35
hg19
Lab
68
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ATAC-seq
tissue
coronary artery
35
retina
15
pigmented layer of retina
12
adipose tissue
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
in vitro differentiated cells
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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