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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
control
54
histone
54
histone modification
33
broad histone mark
21
narrow histone mark
Date released
37
August, 2017
11
November, 2017
6
October, 2017
Available data
bigWig
3086
bam
1752
bed narrowPeak
1581
tsv
1114
fastq
1042
bigBed narrowPeak
330
tagAlign
322
bed broadPeak
285
bigBed broadPeak
260
bed bed3+
154
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
4
bed bedgraph
4
tar
3
cool
2
bed bed3
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
54
Homo sapiens
Biosample type
42
tissue
12
in vitro differentiated cells
Organ
18
connective tissue
17
brain
17
liver
6
adipose tissue
2
pancreas
Project
54
AMP
Genome assembly (visualization)
1
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
1
missing controlled_by
assay_title!
CRISPR genome editing followed by sgRNA sequencing
files.file_type!
bigWig
month_released!
February, 2023
target.investigated_as!
control
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
tissue
liver
17
brain
6
cingulate gyrus
6
subcutaneous abdominal adipose tissue
6
islet of Langerhans
2
+ See 3 more…
in vitro differentiated cells
adipocyte
12
See all biosamples
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