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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
58
total RNA-seq
18
DNase-seq
8
ATAC-seq
1
pCHi-C
Assay category
58
Transcription
26
DNA accessibility
Date released
150
February, 2021
18
June, 2019
February, 2023
1
May, 2021
Available data
84
bam
84
txt
76
bigWig
58
tsv
26
bed narrowPeak
18
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
18
bigBed narrowPeak
Organism
169
Homo sapiens
Biosample type
168
tissue
1
primary cell
Organ
890
pancreas
791
liver
670
connective tissue
490
adipose tissue
472
epithelium
357
heart
354
kidney
285
brain
201
vasculature
195
blood vessel
151
bone element
122
limb
106
artery
96
musculature of body
69
blood
69
bodily fluid
43
nerve
37
embryo
30
eye
25
spleen
22
vein
20
lung
18
ureter
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
168
AMP
1
T1D
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
168
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
month_released!
February, 2023
BIOSAMPLE
ASSAY
169 results
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RNA microarray
total RNA-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
+ See 8 more…
primary cell
megakaryocyte
1
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