Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
11
single cell RNA-seq
Assay category
94
DNA binding
11
Transcription
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
105
bam
105
fastq
83
bigWig
72
bed narrowPeak
50
bigBed narrowPeak
15
bed bed3+
11
tsv
Organism
105
Homo sapiens
Biosample type
48
tissue
43
in vitro differentiated cells
11
primary cell
3
stem cell
Organ
pancreas
63
liver
52
epithelium
13
embryo
2
connective tissue
Project
105
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
105
AMP-T2D consortium
Audit category:
27
inconsistent control
5
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_title!
CRISPR genome editing followed by sgRNA sequencing
organ_slims!
pancreas
BIOSAMPLE
ASSAY
105 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
pancreatic cell
3
endothelial cell
2
mast cell
2
pancreatic epsilon cell
2
mesenchymal cell
1
+ See 1 more…
stem cell
hESC
3
See all biosamples
Download