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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
1
DNase-seq
1
RRBS
1
small RNA-seq
total RNA-seq
Assay category
10
DNA binding
1
DNA accessibility
1
DNA methylation
1
Transcription
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
11
June, 2019
2
July, 2019
Available data
12
bam
10
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
tsv
Organism
13
Homo sapiens
Biosample type
tissue
13
primary cell
Organ
204
epithelium
150
pancreas
60
connective tissue
45
kidney
43
vasculature
40
blood vessel
34
liver
23
heart
22
vein
14
artery
13
musculature of body
12
brain
9
blood
9
bodily fluid
5
eye
1
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
Project
13
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
total RNA-seq
biosample_type!
tissue
files.file_type!
fastq
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
DNase-seq
RRBS
small RNA-seq
primary cell
skeletal muscle satellite cell
8
1
skeletal muscle cell
2
1
1
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