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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ATAC-seq
19
total RNA-seq
2
Hi-C
1
CRISPR RNA-seq
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
22
Transcription
19
DNA accessibility
2
3D chromatin structure
Date released
581
February, 2021
400
November, 2017
382
August, 2017
333
May, 2020
312
August, 2021
305
May, 2021
257
October, 2019
176
June, 2019
142
February, 2023
130
July, 2018
120
May, 2022
115
May, 2019
94
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
47
September, 2023
46
March, 2020
40
May, 2024
40
September, 2020
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
4
March, 2023
2
December, 2019
1
August, 2018
1
August, 2022
1
June, 2018
1
October, 2022
Available data
38
bam
19
bed narrowPeak
19
bigWig
19
tsv
2
hic
1
bedpe bed3+
Organism
40
Homo sapiens
Biosample type
39
tissue
2
cell line
1
primary cell
1
stem cell
Organ
39
pancreas
Project
39
AMP
3
community
1
ITG
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
39
AMP-T2D consortium
3
Anna Gloyn, Oxford
1
ITG
Audit category:
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
audit.ERROR.category!
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
CRISPR RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
islet of Langerhans
19
19
1
cell line
EndoC-BH1
1
1
primary cell
chondrocytes
1
stem cell
SB Ad3.1
1
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