Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
15
ChIP-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
27
Transcription
15
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
broad histone mark
15
narrow histone mark
Date released
619
February, 2021
340
May, 2020
302
August, 2017
302
May, 2021
267
August, 2021
233
October, 2019
210
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
108
July, 2019
79
December, 2017
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
53
March, 2020
49
April, 2018
49
November, 2017
47
September, 2023
45
November, 2019
43
April, 2019
31
February, 2018
27
November, 2018
25
February, 2020
20
May, 2024
16
January, 2021
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
5
March, 2019
4
August, 2018
3
January, 2019
3
June, 2018
3
October, 2022
2
March, 2023
1
August, 2022
Available data
56
fastq
55
bam
55
bigWig
29
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
56
Homo sapiens
Biosample type
56
primary cell
Organ
55
pancreas
51
epithelium
Project
56
AMP
Genome assembly (visualization)
55
GRCh38
55
hg19
Lab
56
AMP-T2D consortium
Audit category:
15
missing controlled_by
assay_title!
CRISPRi RNA-seq
biosample_type!
cell line
lab.title!
Xin Sun, UCSD
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
56 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
4
7
4
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic acinar cell
2
4
3
pancreatic endocrine cell
4
+ See 1 more…
See all biosamples
Download