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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
3
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
21
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
55
Homo sapiens
Biosample type
53
tissue
2
primary cell
Organ
319
pancreas
222
epithelium
221
kidney
167
liver
164
heart
112
connective tissue
101
bone element
78
vasculature
77
blood vessel
65
adipose tissue
62
brain
56
artery
55
eye
31
limb
25
musculature of body
19
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
8
embryo
8
spleen
6
vein
4
gonad
4
ovary
1
bone marrow
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
55
AMP
Genome assembly (visualization)
28
hg19
Lab
55
AMP-T2D consortium
assay_title!
CRISPRi RNA-seq
files.file_type!
bigWig
month_released!
March, 2020
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
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