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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
snATAC-seq
15
RRBS
10
WGBS
6
Hi-C
4
ATAC-seq
2
FAIRE-seq
Assay category
25
DNA methylation
22
DNA accessibility
6
3D chromatin structure
Date released
403
November, 2017
322
August, 2017
251
October, 2019
226
May, 2021
213
June, 2019
200
May, 2022
196
August, 2021
154
February, 2023
152
May, 2020
142
February, 2021
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
70
May, 2019
59
September, 2020
47
September, 2018
47
September, 2023
41
November, 2019
40
May, 2024
37
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
17
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
4
July, 2018
4
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
75
bigWig
73
bam
tsv
22
bed bedMethyl
22
bigBed bedMethyl
5
bed narrowPeak
2
bed bed3+
2
bigBed narrowPeak
2
hdf5
Organism
53
Homo sapiens
Biosample type
34
tissue
19
primary cell
Organ
14
heart
10
pancreas
8
blood
8
bodily fluid
8
epithelium
7
brain
7
vasculature
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
1
artery
1
eye
1
pericardium
Project
37
AMP
16
T1D
Genome assembly (visualization)
22
hg19
11
GRCh38
Lab
37
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
files.file_type!
tsv
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
53 results
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Clear Filters
snATAC-seq
RRBS
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
islet of Langerhans
4
1
pancreas
4
1
gastrocnemius medialis
4
heart right ventricle
2
+ See 10 more…
primary cell
peripheral blood mononuclear cell
8
astrocyte of the cerebellum
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 7 more…
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