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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
DNase-seq
4
Hi-C
Assay category
40
DNA accessibility
4
3D chromatin structure
Date released
34
June, 2019
4
July, 2019
4
October, 2019
2
November, 2018
Available data
341
bam
301
bigWig
265
bed narrowPeak
140
bigBed narrowPeak
94
tsv
58
tagAlign
45
bed broadPeak
44
bed bed3+
42
bigBed broadPeak
12
fastq
4
hdf5
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
1
bed bed3
1
tagAlign bed3+
1
tar
Organism
44
Homo sapiens
Biosample type
32
tissue
12
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
44
AMP
Genome assembly (visualization)
40
GRCh38
33
hg19
Lab
44
AMP-T2D consortium
assay_title!
CRISPRi RNA-seq
month_released!
November, 2017
BIOSAMPLE
ASSAY
44 results
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DNase-seq
Hi-C
tissue
brain
14
coronary artery
2
frontal cortex
2
tibial artery
2
Ammon's horn
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
endothelial cell of umbilical vein
2
astrocyte of the hippocampus
1
+ See 3 more…
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