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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
5
MeRIP-seq
Assay category
12
DNA binding
Target of assay
172
histone
172
histone modification
95
broad histone mark
77
narrow histone mark
28
transcription factor
17
control
11
RNA binding protein
5
nucleotide modification
Date released
8
May, 2021
5
November, 2020
4
August, 2021
Available data
3
bigWig
Organism
17
Homo sapiens
Biosample type
7
cell line
5
in vitro differentiated cells
3
primary cell
2
tissue
Organ
5
pancreas
4
liver
3
epithelium
Project
17
AMP
Genome assembly (visualization)
3
hg19
Lab
AMP-T2D consortium
8
Kyle Gaulton, UCSD
5
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
lab.title!
AMP-T2D consortium
month_released!
October, 2017
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
MeRIP-seq
cell line
HepG2
4
EndoC_BH1
3
in vitro differentiated cells
embryonic stem cell
5
primary cell
CD8-positive, alpha-beta T cell
3
tissue
islet of Langerhans
2
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