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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
368
ChIP-seq
Assay category
368
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
368
November, 2017
314
May, 2020
304
August, 2021
276
May, 2021
203
June, 2019
169
August, 2017
158
October, 2019
149
February, 2023
102
July, 2019
96
May, 2022
85
May, 2019
81
November, 2018
78
December, 2017
57
April, 2019
49
March, 2020
47
September, 2023
40
September, 2020
35
December, 2018
31
February, 2018
27
January, 2019
25
May, 2024
24
February, 2020
23
October, 2018
19
April, 2020
16
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
4
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
363
bam
314
fastq
304
bigWig
284
bed narrowPeak
284
bigBed narrowPeak
57
bed broadPeak
55
bigBed broadPeak
52
tagAlign
3
tar
Organism
368
Homo sapiens
Biosample type
308
cell line
54
tissue
6
primary cell
Organ
308
liver
60
brain
4
epithelium
4
vasculature
2
blood vessel
Project
368
AMP
Genome assembly (visualization)
267
hg19
252
GRCh38
Lab
368
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
16
inconsistent control read length
4
inconsistent control run_type
assay_title!
CRISPRi RNA-seq
organ_slims!
ovary
pancreas
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
368 results
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Clear Filters
ChIP-seq
cell line
HepG2
308
tissue
layer of hippocampus
15
caudate nucleus
10
substantia nigra
10
cingulate gyrus
9
middle frontal area 46
9
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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