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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
88
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
70
histone
70
histone modification
43
broad histone mark
27
narrow histone mark
16
control
7
transcription factor
RNA binding protein
Date released
670
February, 2021
403
August, 2017
369
November, 2017
314
August, 2021
314
October, 2019
296
May, 2020
241
May, 2021
214
June, 2019
168
July, 2018
115
May, 2019
108
July, 2019
106
February, 2023
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
66
May, 2022
65
October, 2018
60
November, 2019
57
March, 2020
49
April, 2018
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
133
bam
98
bed narrowPeak
92
bigWig
61
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
136
Homo sapiens
Biosample type
116
tissue
15
cell line
5
in vitro differentiated cells
Organ
54
heart
54
pancreas
22
kidney
15
epithelium
1
adipose tissue
1
connective tissue
Project
136
AMP
Genome assembly (visualization)
120
hg19
117
GRCh38
Lab
136
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_title!
Capture-C
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
136 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
32
kidney
22
heart right ventricle
13
heart
9
+ See 1 more…
cell line
EndoC_BH1
12
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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