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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
7
DNase-seq
2
FAIRE-seq
Assay category
53
DNA binding
9
DNA accessibility
Target of assay
43
histone
43
histone modification
27
broad histone mark
16
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
14
August, 2017
4
June, 2019
3
November, 2018
1
May, 2019
Available data
429
bam
373
bigWig
275
tsv
213
fastq
123
bed narrowPeak
62
bigBed narrowPeak
27
bed bed3+
20
bed broadPeak
16
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
bigBed broadPeak
6
txt
3
bedpe bed3+
3
hic
1
bedpe
Organism
56
Homo sapiens
Biosample type
62
tissue
22
primary cell
7
cell line
Organ
116
brain
88
heart
87
kidney
84
limb
62
blood vessel
62
pancreas
62
vasculature
49
liver
38
musculature of body
26
nerve
25
artery
18
ureter
13
spleen
10
adipose tissue
10
connective tissue
3
eye
Project
62
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
62
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
assay_title!
Capture-C
files.file_type!
ibed
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
pancreas
13
2
1
endocrine pancreas
14
islet of Langerhans
1
1
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