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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
236
histone
histone modification
133
narrow histone mark
103
broad histone mark
67
control
5
transcription factor
Date released
23
May, 2020
11
August, 2017
11
November, 2017
9
October, 2019
8
August, 2021
8
February, 2021
May, 2021
2
October, 2017
Available data
2416
bam
2113
bigWig
1427
tsv
1128
fastq
949
bed narrowPeak
651
bigBed narrowPeak
257
bed broadPeak
255
bigBed broadPeak
244
bed bed3+
161
txt
153
zippedFastqFolder
72
tagAlign
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
71
Homo sapiens
Biosample type
52
tissue
9
cell line
9
in vitro differentiated cells
2
primary cell
Organ
28
liver
19
brain
6
artery
6
blood vessel
6
heart
6
vasculature
3
connective tissue
2
musculature of body
2
pancreas
1
adipose tissue
1
epithelium
Project
72
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
72
AMP-T2D consortium
assay_title!
Capture-C
lab.title!
KPMP
month_released!
May, 2021
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
72 results
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ChIP-seq
tissue
liver
26
brain
2
caudate nucleus
2
cingulate gyrus
2
layer of hippocampus
2
+ See 15 more…
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
in vitro differentiated cells
neural progenitor cell
7
adipocyte
2
primary cell
hepatocyte
1
skeletal muscle myoblast
1
See all biosamples
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