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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
ChIP-seq
1
Hi-C
Assay category
127
DNA binding
1
3D chromatin structure
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
33
transcription factor
control
7
RNA binding protein
2
chromatin remodeller
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
303
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
127
bam
127
bed narrowPeak
127
bigBed narrowPeak
127
bigWig
31
fastq
Organism
128
Homo sapiens
Biosample type
96
tissue
28
cell line
4
primary cell
Organ
39
blood vessel
39
vasculature
27
blood
27
bodily fluid
25
brain
15
heart
6
limb
6
musculature of body
4
epithelium
4
kidney
3
artery
3
spleen
1
liver
1
pancreas
Project
128
AMP
Genome assembly (visualization)
127
hg19
126
GRCh38
Lab
128
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
inconsistent control
assay_title!
Capture-C
target.investigated_as!
control
BIOSAMPLE
ASSAY
128 results
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ChIP-seq
Hi-C
tissue
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
aorta
11
+ See 7 more…
cell line
GM12878
27
HepG2
1
primary cell
kidney epithelial cell
4
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