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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
5
total RNA-seq
3
DNase-seq
2
WGBS
1
ATAC-seq
1
Hi-C
1
RRBS
Assay category
5
Transcription
4
DNA accessibility
3
DNA methylation
1
3D chromatin structure
Date released
5
January, 2019
4
November, 2018
3
August, 2017
1
December, 2018
Available data
190
bigWig
174
tsv
171
bam
28
bed narrowPeak
13
fastq
7
bed bed3+
6
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
13
Homo sapiens
Biosample type
7
cell line
6
tissue
Organ
pancreas
185
epithelium
13
liver
11
connective tissue
7
adipose tissue
5
embryo
4
spleen
3
brain
2
musculature of body
Project
13
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
13
AMP-T2D consortium
assay_title!
ChIP-seq
HiChIP
organ_slims!
pancreas
BIOSAMPLE
ASSAY
13 results
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Clear Filters
total RNA-seq
DNase-seq
WGBS
ATAC-seq
Hi-C
RRBS
cell line
HepG2
5
1
1
tissue
liver
2
1
1
right lobe of liver
1
1
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